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44 Open 101 Closed
44 Open 101 Closed
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Issues list

ncbi-genome-download works with refseq for me, but not genbank
#234 opened Nov 19, 2024 by Laura-Alex
1
file type requested not found in NCBI
#232 opened Aug 27, 2024 by mvalvano
1
Failing during checking assembly? question
#224 opened Jun 13, 2024 by Thomieh73
1
Host Link Could be Incorrect not shipped yet
#223 opened Mar 12, 2024 by Mohammed-Quraishi
2
/path error when running ncbi-genome-download in a shell script need info Needs more info from the issue reporter
#216 opened Sep 19, 2023 by KinSimon96
1
gimme_taxa.py / ngd mismatched format not shipped yet
#215 opened Aug 27, 2023 by zreitz
2
Collect author info from other ncbi-genome-download contributors. enhancement
#214 opened Jul 28, 2023 by kblin
Can't download unclassified organisms
#206 opened May 10, 2023 by MatthieuBoulinguiez
Number of genomes downloaded not corresponding to number of entries
#205 opened Apr 16, 2023 by arfaiq
1
Check if accessions has CDS?
#203 opened Feb 21, 2023 by ElinorSterner
1
Option for metadata file only
#202 opened Jan 31, 2023 by Ahmed-Shibl
1
Feature request: filter by length of sequence
#199 opened Dec 17, 2022 by Tylersuard
Databases version
#197 opened Oct 4, 2022 by SergeyBaikal
Missing genomes when downloading with genura
#196 opened Sep 22, 2022 by WEIGUO93
.I use commond line" ncbi-genome-download --formats fasta viral" to load refseq virus,it is 1847 complete squeuces in total,is it right?
#195 opened Apr 18, 2022 by qinjunjun
3
Error while downloading genera
#194 opened Apr 11, 2022 by sanyalab
Downloading of cDNA, GFF3, and EST sequences
#193 opened Apr 8, 2022 by sanyalab
newB question - can I get the "reference" genome for a tax ID?
#192 opened Mar 22, 2022 by RichardCorbett
Download problem
#191 opened Mar 22, 2022 by XLOXL
2
ERROR: No downloads matched your filter. Please check your options.
#174 opened Sep 29, 2021 by jolespin
1
Pseudogenes download
#143 opened Apr 4, 2021 by gkoulouras
2
Filenames with genus, species and strain?
#142 opened Jan 29, 2021 by johanneswerner
Reference sequence
#141 opened Jan 21, 2021 by kate-simonova
problems downloading genome
#140 opened Dec 1, 2020 by Timmywang1
1
Some RefSeq genomes not being downloaded
#139 opened Nov 2, 2020 by sskashaf
ProTip! Exclude everything labeled bug with -label:bug.